Supplementary Data for: A time-calibrated 'Tree of Life' of aquatic insects for knitting historical patterns of evolution and measuring extant phylogenetic biodiversity across the world

  1. García-Girón, Jorge 1
  2. Múrria, Cesc 2
  3. Arnedo, Miquel A. 2
  4. Bonada, Núria 3
  5. Cañedo-Argüelles, Miguel 4
  6. Derka, Tomáš 5
  7. Fernández-Calero, Jose María 3
  8. Li, Zhengfei 6
  9. De Figueroa, José Manuel Tierno 7
  10. Zhicai Xie 6
  11. Heino, Jani 1
  1. 1 Geography Research Unit, University of Oulu, P.O. Box 3000, FI-90014 Oulu, Finland
  2. 2 Grup de Recerca Zoological Systematics and Evolution (ZooSysEvo), Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Facultat de Biologia, Universitat de Barcelona, 08028 Barcelona, Spain
  3. 3 Grup de Recerca Freshwater Ecology, Hydrology and Management (FEHM), Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Facultat de Biologia, Universitat de Barcelona, 08028 Barcelona, Spain
  4. 4 Surface Hydrology, Ecology, and Erosion Group (SHE2), Institute of Environmental Assessment and Water Research, Spanish National Research Council (IDAEA-CSIC), 08034 Barcelona, Spain
  5. 5 Department of Ecology, Faculty of Natural Sciences, Comenius University, 842 15 Bratislava, Slovakia
  6. 6 The Key Laboratory of Aquatic Biodiversity and Conservation, Institute of Hydrobiology, Chinese Academy of Sciences, 430072 Wuhan, China
  7. 7 Department of Zoology, Faculty of Sciences, Universidad de Granada, 18071 Granada, Spain
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Editor: Zenodo

Year of publication: 2023

Type: Dataset

CC BY 4.0

DOI: 10.5281/ZENODO.7990255 lock_openOpen access editor

Abstract

This compendium of files includes the dated phylogenetic tree in Newick format (<strong>Data S1</strong>), the list of statistical routines used for the three empirical case studies (<strong>Data S2</strong>), and the high-resolution version of the figures in the supplementary materials and main text (<strong>Data S3</strong>) for the <em>Earth-Science Reviews</em> paper "A time-calibrated ‘Tree of Life’ of aquatic insects for knitting historical patterns of evolution and measuring extant phylogenetic biodiversity across the world", which is under consideration. The best-scoring molecular tree (<strong>Data S1</strong>) can be opened using freely available programs like R (R Development Core Team, 2021), Dendroscope (Huson and Scornavacca, 2012), and FigTree (Rambaut, 2018). Please, feel free to send an email to the maintainer Dr. Jorge García Girón (jogarg@unileon.es OR Jorge.Garcia-Giron@oulu.fi) if you face any trouble downloading, opening, or using these files. Huson, D. H., &amp; Scornavacca, C. (2012). Dendroscope 3: An interactive tool for rooted phylogenetic trees and networks. <em>Systematic Biology</em>, <em>61(6)</em>, 1061–1067. R Development Core Team (2021). R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. https://www.R-project.org/ Rambaut, A. (2018). FigTree. Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK. http://tree.bio.ed.ac.uk/software/figtree/