Supplementary Data for: A time-calibrated 'Tree of Life' of aquatic insects for knitting historical patterns of evolution and measuring extant phylogenetic biodiversity across the world

  1. Jorge García-Girón 1
  2. Cesc Múrria 2
  3. Miquel A. Arnedo 2
  4. Núria Bonada 3
  5. Miguel Cañedo-Argüelles 4
  6. Tomáš Derka 5
  7. Jose María Fernández-Calero 3
  8. Zhengfei Li 6
  9. José Manuel Tierno de Figueroa 7
  10. Zhicai Xie 6
  11. Jani Heino 1
  1. 1 Geography Research Unit, University of Oulu, P.O. Box 3000, FI-90014 Oulu, Finland
  2. 2 Grup de Recerca Zoological Systematics and Evolution (ZooSysEvo), Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Facultat de Biologia, Universitat de Barcelona, 08028 Barcelona, Spain
  3. 3 Grup de Recerca Freshwater Ecology, Hydrology and Management (FEHM), Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Facultat de Biologia, Universitat de Barcelona, 08028 Barcelona, Spain
  4. 4 Surface Hydrology, Ecology, and Erosion Group (SHE2), Institute of Environmental Assessment and Water Research, Spanish National Research Council (IDAEA-CSIC), 08034 Barcelona, Spain
  5. 5 Department of Ecology, Faculty of Natural Sciences, Comenius University, 842 15 Bratislava, Slovakia
  6. 6 The Key Laboratory of Aquatic Biodiversity and Conservation, Institute of Hydrobiology, Chinese Academy of Sciences, 430072 Wuhan, China
  7. 7 Department of Zoology, Faculty of Sciences, Universidad de Granada, 18071 Granada, Spain
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Editor: Zenodo

Año de publicación: 2023

Tipo: Dataset

CC BY 4.0

DOI: 10.5281/ZENODO.7990254 lock_openAcceso abierto editor

Resumen

This compendium of files includes the dated phylogenetic tree in Newick format (Data S1), the list of statistical routines used for the three empirical case studies (Data S2), and the high-resolution version of the figures in the supplementary materials and main text (Data S3) for the Earth-Science Reviews paper "A time-calibrated ‘Tree of Life’ of aquatic insects for knitting historical patterns of evolution and measuring extant phylogenetic biodiversity across the world", which is under consideration. The best-scoring molecular tree (Data S1) can be opened using freely available programs like R (R Development Core Team, 2021), Dendroscope (Huson and Scornavacca, 2012), and FigTree (Rambaut, 2018). Please, feel free to send an email to the maintainer Dr. Jorge García Girón (jogarg@unileon.es OR Jorge.Garcia-Giron@oulu.fi) if you face any trouble downloading, opening, or using these files. Huson, D. H., & Scornavacca, C. (2012). Dendroscope 3: An interactive tool for rooted phylogenetic trees and networks. Systematic Biology, 61(6), 1061–1067. R Development Core Team (2021). R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. https://www.R-project.org/ Rambaut, A. (2018). FigTree. Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK. http://tree.bio.ed.ac.uk/software/figtree/